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scikit-bio

scikit-bio is an open-source, BSD-licensed Python 3 package providing data structures, algorithms and educational resources for bioinformatics.

homepage: http://scikit-bio.org

Available installations

scikit-bio version Supported CPU targets Supported GPU targets EESSI version Module
0.6.0 generic: aarch64, x86_64
Arm: a64fx, neoverse_n1, neoverse_v1, nvidia/grace
AMD: zen2, zen3, zen4
Intel: haswell, skylake_avx512, sapphirerapids, icelake, cascadelake
(none) 2023.06 scikit-bio/0.6.0-foss-2023a

Extensions

Overview of extensions included in scikit-bio installations

hdmedians

hdmedians version scikit-bio modules that include it
0.14.2 scikit-bio/0.6.0-foss-2023a

natsort

natsort version scikit-bio modules that include it
8.4.0 scikit-bio/0.6.0-foss-2023a

scikit-bio

scikit-bio version scikit-bio modules that include it
0.6.0 scikit-bio/0.6.0-foss-2023a