ncbi-vdb¶
The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
https://github.com/ncbi/ncbi-vdb
Available modules¶
The overview below shows which ncbi-vdb installations are available per target architecture in EESSI, ordered based on software version (new to old).
To start using ncbi-vdb, load one of these modules using a module load command like:
(This data was automatically generated on Wed, 14 May 2025 at 12:49:32 UTC)
| aarch64/generic | aarch64/neoverse_n1 | aarch64/neoverse_v1 | aarch64/nvidia/grace | x86_64/generic | x86_64/amd/zen2 | x86_64/amd/zen3 | x86_64/amd/zen4 | x86_64/intel/haswell | x86_64/intel/sapphirerapids | x86_64/intel/skylake_avx512 | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ncbi-vdb/3.0.10-gompi-2023a | x | x | x | x | x | x | x | x | x | x | x |
| ncbi-vdb/3.0.5-gompi-2022b | x | x | x | x | x | x | x | x | x | x | x |