Trimmomatic¶
Trimmomatic performs a variety of useful trimming tasks for illumina paired-end and single ended data.The selection of trimming steps and their associated parameters are supplied on the command line.
homepage: http://www.usadellab.org/cms/?page=trimmomatic
Available installations¶
| Trimmomatic version | Supported CPU targets | Supported GPU targets | EESSI version | Module |
|---|---|---|---|---|
| 0.39 | generic: aarch64, x86_64Arm: a64fx, neoverse_n1, neoverse_v1, nvidia/graceAMD: zen2, zen3, zen4Intel: haswell, skylake_avx512, sapphirerapids, icelake, cascadelake |
(none) | 2023.06 | Trimmomatic/0.39-Java-11 |