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SMC++

SMC++ is a program for estimating the size history of populations from whole genome sequence data.

homepage: https://github.com/popgenmethods/smcpp

Available installations

SMC++ version Supported CPU targets Supported GPU targets EESSI version Module
1.15.4 generic: aarch64, x86_64
Arm: a64fx, neoverse_n1, neoverse_v1, nvidia/grace
AMD: zen2, zen3, zen4, zen5
Intel: haswell, skylake_avx512, sapphirerapids, icelake, cascadelake
(none) 2025.06 SMC++/1.15.4-gfbf-2025b

Extensions

Overview of extensions included in SMC++ installations

smcpp

smcpp version SMC++ modules that include it
1.15.4 SMC++/1.15.4-gfbf-2025b