SEPP¶
SATe-enabled Phylogenetic Placement - addresses the problem of phylogenetic placement of short reads into reference alignments and trees.
homepage: https://github.com/smirarab/sepp
Available installations¶
| SEPP version | Supported CPU targets | Supported GPU targets | EESSI version | Module |
|---|---|---|---|---|
| 4.5.1 | generic: aarch64, x86_64Arm: a64fx, neoverse_n1, neoverse_v1, nvidia/graceAMD: zen2, zen3, zen4Intel: haswell, skylake_avx512, sapphirerapids, icelake, cascadelake |
(none) | 2023.06 | SEPP/4.5.1-foss-2022b |