Mustache¶
Mustache (Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation) is a tool for multi-scale detection of chromatin loops from Hi-C and Micro-C contact maps in high resolutions (10kbp all the way to 500bp and even more). Mustache uses recent technical advances in scale-space theory in Computer Vision to detect chromatin loops caused by interaction of DNA segments with a variable size.
homepage: https://github.com/ay-lab/mustache
Available installations¶
| Mustache version | Supported CPU targets | Supported GPU targets | EESSI version | Module |
|---|---|---|---|---|
| 1.3.3 | generic: aarch64, x86_64Arm: a64fx, neoverse_n1, neoverse_v1, nvidia/graceAMD: zen2, zen3, zen4Intel: haswell, skylake_avx512, sapphirerapids, icelake, cascadelake |
(none) | 2023.06 | Mustache/1.3.3-foss-2023b |