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MEGAHIT

An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

homepage: https://github.com/voutcn/megahit

Available installations

MEGAHIT version Supported CPU targets Supported GPU targets EESSI version Module
1.2.9 generic: aarch64, x86_64
Arm: a64fx, neoverse_n1, neoverse_v1, nvidia/grace
AMD: zen2, zen3, zen4
Intel: haswell, skylake_avx512, sapphirerapids, icelake, cascadelake
(none) 2023.06 MEGAHIT/1.2.9-GCCcore-12.3.0