CD-HIT¶
CD-HIT is a very widely used program for clustering and comparing protein or nucleotide sequences.
http://weizhongli-lab.org/cd-hit/
Available modules¶
The overview below shows which CD-HIT installations are available per target architecture in EESSI, ordered based on software version (new to old).
To start using CD-HIT, load one of these modules using a module load command like:
(This data was automatically generated on Fri, 06 Feb 2026 at 13:12:13 UTC)
| aarch64/generic | aarch64/a64fx | aarch64/neoverse_n1 | aarch64/neoverse_v1 | aarch64/nvidia/grace | x86_64/generic | x86_64/amd/zen2 | x86_64/amd/zen3 | x86_64/amd/zen4 | x86_64/intel/cascadelake | x86_64/intel/haswell | x86_64/intel/icelake | x86_64/intel/sapphirerapids | x86_64/intel/skylake_avx512 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CD-HIT/4.8.1-GCC-12.2.0 | x | x | x | x | x | x | x | x | x | x | x | x | x | x |