BCFtools¶
Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants
https://www.htslib.org/
Available modules¶
The overview below shows which BCFtools installations are available per target architecture in EESSI, ordered based on software version (new to old).
To start using BCFtools, load one of these modules using a module load command like:
(This data was automatically generated on Thu, 31 Jul 2025 at 12:55:01 UTC)
| aarch64/generic | aarch64/neoverse_n1 | aarch64/neoverse_v1 | aarch64/nvidia/grace | x86_64/generic | x86_64/amd/zen2 | x86_64/amd/zen3 | x86_64/amd/zen4 | x86_64/intel/cascadelake | x86_64/intel/haswell | x86_64/intel/icelake | x86_64/intel/sapphirerapids | x86_64/intel/skylake_avx512 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BCFtools/1.18-GCC-12.3.0 | x | x | x | x | x | x | x | x | x | x | x | x | x |
| BCFtools/1.17-GCC-12.2.0 | x | x | x | x | x | x | x | x | x | x | x | x | x |